imported post
No one forces you to provide prints for a voluntary document. A passport is not needed if you do not plan to leave the US. If you do not plan to carry CWP, no need for the license and the prints. Certain jobs require prints to ensure you aren't a person of interest or has issues that will be detrimental to a job (security, military, teacher, school bus driver, etc.). You don't have to work at those jobs. In short, fingerprints do not violate your federal 5th as you would voluntarily provide them.
That being said, AFIS is on-line. Your prints are uploaded and saved to the FBI in a matter of minutes these days with the electronic system.
I have been printed for the military (several times), cop, license holder, etc. I have no concerns about your prints magically appearing someplace. Much of that is CSI bullpuckey. However, you can bet your sweet Aunt Fanny that if your prints are located at a scene of a crime or in a stolen vehicle or so on, there will be additional legitimate investigations as to why your prints were there (case in point: I recovered a stolen car. Three sets of prints in the car. One set belonged to a car salesman who was looking at the car when the thieves tried to trade it for another car. His prints were on the rearview mirror but he had no unlawful connection to the car. Hence, the investigation cleared him).